Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
E(bx)

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc167
cell line
Kc167 cells
developmental stage
embryo
Sex
female
treatment
mock
chip antibody
NURF

Sequenced DNA Library

library_name
GSM5945690
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq was performed as described previously (Bag et al., 2019). ChIP-seq library was performed as described previously (Bag et al., 2019, Matzat et al., 2012).

Sequencing Platform

instrument_model
Illumina HiSeq 4000

dm6

Number of total reads
2174710
Reads aligned (%)
94.1
Duplicates removed (%)
32.6
Number of peaks
6657 (qval < 1E-05)

dm3

Number of total reads
2174710
Reads aligned (%)
94.3
Duplicates removed (%)
31.7
Number of peaks
6613 (qval < 1E-05)

Base call quality data from DBCLS SRA